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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53445416_53445611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53445416 - 53445611

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGCAC

5'SS Class:

major

3'SS Sequence:

TTTCCTCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

GCTGCAGTGACT

Flanking Amino Acid:

KEEQRKMKEERHKEYLKMLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

57.5

41.7

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

83.1

0.74

0.7

81.4

23.6

Minor 5ss

29.3

-2.4

3.5

45.6

Minor BPS

44.9

-0.3

2.3

64.78

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024510

53441685 - 53445881

4197