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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53449502_53449591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53449502 - 53449591

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

CCTCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TTCTCAGCAAAC

Flanking Amino Acid:

YYYQPTYNDCQVLREQWIRA

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

67.3

39.4

Major BPS

0.52

1.5

79.6

35.6

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

42.7

-0.8

2.8

58.3

40.4

Minor BPS

43.4

-0.5

2.4

61.17

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020753

53447909 - 53453575

5667

ENSAPLT00000016396

53447278 - 53453575

6298

ENSAPLT00000023283

53447909 - 53452989

5081