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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53449675_53450276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53449675 - 53450276

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

ATGCTCTTAAAA

Flanking Amino Acid:

EPGKQLPYTDGVKEGILWKR

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

77.8

0.69

78.2

31.8

Major PPT

79.6

0.67

0.8

37.3

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

63.4

0.42

1.4

68.37

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020753

53447909 - 53453575

5667

ENSAPLT00000016396

53447278 - 53453575

6298

ENSAPLT00000023283

53447909 - 53452989

5081