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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53451285_53451670_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53451285 - 53451670

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTTGG

5'SS Class:

weak_major

3'SS Sequence:

GTTTCGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAG

U12 Branch Point Sequence:

GCTGCTCTAAGC

Flanking Amino Acid:

NIFVYHKSGKEVVDWFNAIR

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

62.3

44.7

Major BPS

58.2

0.2

1.5

67.3

37.8

Major PPT

0.76

0.9

80.8

36.8

Minor 5ss

54.4

0.15

2.1

67.3

43.8

Minor BPS

45.8

-0.3

55.02

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023283

53447909 - 53452989

5081

ENSAPLT00000020753

53447909 - 53453575

5667

ENSAPLT00000016396

53447278 - 53453575

6298