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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53452156_53452653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53452156 - 53452653

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

GTCACCTTACAA

Flanking Amino Acid:

EGYMEKTGPKQREAFKKRWF

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

69.5

0.48

73.5

28.6

Major PPT

78.3

0.64

0.7

72.9

25.2

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

51.8

0.05

1.8

62.22

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023283

53447909 - 53452989

5081

ENSAPLT00000020753

53447909 - 53453575

5667