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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53452726_53453227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53452726 - 53453227

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

TCCTGATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

GATTCACTAATT

Flanking Amino Acid:

RRLMYFKDPLDAFAKGEVFV

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

56.6

42.5

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

0.47

40.3

Minor 5ss

23.3

-3.1

3.2

25.4

39.4

Minor BPS

56.1

0.27

1.9

76.53

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020753

53447909 - 53453575

5667