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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53477539_53477623_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53477539 - 53477623

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTGAC

5'SS Class:

major

3'SS Sequence:

TGCTCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

ACCCCCTCACCT

Flanking Amino Acid:

EFYSDPHAVAGALKSYLREL

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

63.1

37.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

75.9

0.58

0.8

66.2

35.8

Minor 5ss

26.6

-2.7

3.3

34.1

42.2

Minor BPS

48.6

-0

1.9

63.92

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016460

53475391 - 53481433

6043