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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53477969_53478065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53477969 - 53478065

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCGCT

5'SS Class:

major

3'SS Sequence:

CTCTCTCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATAT

Flanking Amino Acid:

AELKESHRQTEPSFAVDAPV

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

60.8

44.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.1

0.61

0.7

69.1

31.5

Minor 5ss

43.4

-0.7

3.5

65.8

45.3

Minor BPS

54.9

0.23

1.6

71.96

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016460

53475391 - 53481433

6043