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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53478563_53478682_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53478563 - 53478682

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

TCCCCCCCAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TCCCCCCCAAAA

Flanking Amino Acid:

LISDWNAIKSRLNQAAKGSG

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

56.6

42.5

Major BPS

69.1

0.47

60.7

37.6

Major PPT

56.1

0.14

56.6

26.1

Minor 5ss

-2.4

3.7

40.8

45.9

Minor BPS

45.1

-0.3

1.9

55.36

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016460

53475391 - 53481433

6043