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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53479105_53479241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53479105 - 53479241

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CGGCTCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

TTTTCCCCAAAC

Flanking Amino Acid:

HCGSEMDKRVKKLPLMALSM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

67.2

0.39

40.1

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

58.3

0.24

77.36

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016460

53475391 - 53481433

6043