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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53483757_53483850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53483757 - 53483850

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCCCA

5'SS Class:

major

3'SS Sequence:

CCCCCGGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CTCTTCTGACCG

Flanking Amino Acid:

QVLLLANPQKEKVRLRYKLT

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

62.5

43.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

63.6

0.31

0.9

52.7

36.7

Minor 5ss

43.7

-0.7

2.9

57.8

46.4

Minor BPS

48.7

-0.2

1.9

55.07

46.3

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405