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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53484269_53484459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53484269 - 53484459

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGCCGG

5'SS Class:

major

3'SS Sequence:

GCCTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

GGCATCTGAGCG

Flanking Amino Acid:

ITVPLESIKPSSILPVTVYD

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.1

44.7

44.9

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

68.2

0.41

0.9

61.2

35.1

Minor 5ss

-1.8

3.1

44.2

44.3

Minor BPS

43.4

-0.6

1.7

42.44

42.1

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405