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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53485024_53485156_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53485024 - 53485156

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCGC

5'SS Class:

major

3'SS Sequence:

GCTCCTTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GCTGATGTACCA

Flanking Amino Acid:

ADSSGWNSFQSSDSSELGVA

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

58.7

46.2

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

73.7

0.53

0.8

36.3

Minor 5ss

36.6

-1.5

3.3

45.6

Minor BPS

38.8

-0.8

2.2

47.93

42.8

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405