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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53485222_53485585_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53485222 - 53485585

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAC

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

SLLDDELMSLGLNDPAPHPA

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

44.9

-0.3

1.4

52.1

43.1

Major PPT

71.8

0.49

0.9

68.1

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405