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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53486152_53486579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53486152 - 53486579

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTCCCTATCT

Flanking Amino Acid:

SDTEDNDEALAEILQANDNL

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.2

39.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.7

0.71

0.8

78.4

34.7

Minor 5ss

-0.2

2.8

59.7

45.1

Minor BPS

69.9

0.7

1.9

93.01

35.3

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405