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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53486662_53486783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53486662 - 53486783

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TATCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TGCCCATTTATC

Flanking Amino Acid:

TTESNEDLMKELYQRCERMR

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

Major BPS

76.3

0.65

67.3

39.3

Major PPT

75.4

0.57

0.8

66.5

35.3

Minor 5ss

26.2

-2.7

2.9

30.9

42.7

Minor BPS

47.5

-0.2

1.9

58.2

40.4

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016484

53483646 - 53490050

6405

ENSAPLT00000030479

53482402 - 53490050

7649