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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53487372_53487648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53487372 - 53487648

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGGG

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

GGGCTCAGAGCT

Flanking Amino Acid:

IIFDDEEKSKILARLLKSSH

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

61.1

43.7

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

-2.5

3.5

37.8

47.1

Minor BPS

40.7

-0.6

1.8

53.09

41.1

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405