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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53487750_53488110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53487750 - 53488110

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

ACCTCCTGACAG

Flanking Amino Acid:

LEAYQMLKKQGIVKSDPKLP

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

0.63

0.8

71.8

32.9

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

45.7

-0.4

1.9

47.65

45.3

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405