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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53488235_53489068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53488235 - 53489068

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCCC

5'SS Class:

major

3'SS Sequence:

TGCTCTCCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGGAT

U12 Branch Point Sequence:

TCGGCTTCAGGC

Flanking Amino Acid:

NELIKVVSPKYLGSRTPEKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

65.8

40.2

Major BPS

0.1

1.4

54.7

43.1

Major PPT

74.5

0.55

0.8

66.4

35.8

Minor 5ss

28.6

-2.4

35.8

Minor BPS

40.5

-0.7

45.46

43.8

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405