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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53489168_53489554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53489168 - 53489554

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GCGCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACAAAT

U12 Branch Point Sequence:

AAATCCCAAACC

Flanking Amino Acid:

QEWEAIQALTVLESCMKSCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

70.8

39.4

Major BPS

51.7

0.04

1.2

59.2

35.9

Major PPT

67.1

0.39

0.9

57.6

38.6

Minor 5ss

32.3

-2

3.6

48.7

Minor BPS

50.5

-0

64.09

40.7

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405