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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53489631_53489843_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53489631 - 53489843

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATTTCACTAAGC

Flanking Amino Acid:

FCEQLNKELEGPPLATRLLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

77.2

0.61

69.1

41.8

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

50.1

-0

2.2

71.04

39.7

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030479

53482402 - 53490050

7649

ENSAPLT00000016484

53483646 - 53490050

6405