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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53489929_53490019_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53489929 - 53490019

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

GTGCCGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CCGGGCTGAGGC

Flanking Amino Acid:

MEPETLEARINKATSPLNKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

62.8

43.3

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

62.3

0.28

0.9

54.3

36.5

Minor 5ss

31.9

-2.1

2.7

40.1

Minor BPS

-1.2

33.89

41.9

Associated Gene:

Gene:

GGA1

Ensembl Gene ID:

ENSAPLG00000015801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016484

53483646 - 53490050

6405

ENSAPLT00000030479

53482402 - 53490050

7649