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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53563224_53575307_F

Intron Information:

Intron Rank:

147166

Intron Class:

major

Intron Phase:

Intron Coordinates:

53563224 - 53575307

Intron Length:

12084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

69.8

39.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.63

0.7

72.3

25.7

Minor 5ss

31.6

-2.1

3.3

40.8

45.6

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028097

53562609 - 53575797

13189