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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53655095_53655564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53655095 - 53655564

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

TCACTGCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GGCTTTTGAACC

Flanking Amino Acid:

PSREGWLLKLGGRVKTWKRR

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.5

32.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

72.6

0.51

0.9

69.6

36.5

Minor 5ss

29.5

-2.3

3.5

40.1

46.3

Minor BPS

55.4

0.15

1.4

60.14

Associated Gene:

Gene:

CYTH4

Ensembl Gene ID:

ENSAPLG00000016113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033043

53652775 - 53670004

17230

ENSAPLT00000016843

53653586 - 53664764

11179