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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53655677_53657566_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53655677 - 53657566

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCGGGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

CCCCCTCTAATG

Flanking Amino Acid:

GADLPEELLKNLFESIKNEP

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

82.2

0.8

0.9

81.6

Major PPT

57.6

0.17

1.1

53.5

41.5

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

-0.4

1.7

44.5

42.4

Associated Gene:

Gene:

CYTH4

Ensembl Gene ID:

ENSAPLG00000016113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033043

53652775 - 53670004

17230

ENSAPLT00000016843

53653586 - 53664764

11179