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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53657716_53658279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53657716 - 53658279

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTGACA

Flanking Amino Acid:

KCNPGVFQSTDTCYILSFSI

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

76.1

0.59

72.5

36.7

Minor 5ss

-1.4

3.1

50.1

46.4

Minor BPS

70.7

0.64

1.6

79.83

Associated Gene:

Gene:

CYTH4

Ensembl Gene ID:

ENSAPLG00000016113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016843

53653586 - 53664764

11179

ENSAPLT00000033043

53652775 - 53670004

17230