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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53658393_53659012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53658393 - 53659012

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TGCTCCTGACAG

Flanking Amino Acid:

FANLNLVQALRQFLWSFRLP

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

69.3

0.43

64.6

36.6

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

47.7

-0.3

1.9

54.38

Associated Gene:

Gene:

CYTH4

Ensembl Gene ID:

ENSAPLG00000016113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033043

53652775 - 53670004

17230

ENSAPLT00000016843

53653586 - 53664764

11179