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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53659094_53659483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53659094 - 53659483

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTCTTCTAATC

Flanking Amino Acid:

KTAIGDFLGGRDPTNIQILQ

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.5

32.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.7

0.62

0.8

69.3

36.9

Minor 5ss

38.7

-1.3

49.2

47.3

Minor BPS

52.3

0.05

1.6

63.52

36.5

Associated Gene:

Gene:

CYTH4

Ensembl Gene ID:

ENSAPLG00000016113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016843

53653586 - 53664764

11179

ENSAPLT00000033043

53652775 - 53670004

17230