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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53662027_53662279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53662027 - 53662279

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

CTAAGTTTGACT

Flanking Amino Acid:

ETDHNAGEQTSKLSQRDKLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.5

1.14

0.7

83.7

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

21.7

-3.3

3.8

31.8

42.6

Minor BPS

0.08

1.9

68.07

43.2

Associated Gene:

Gene:

CYTH4

Ensembl Gene ID:

ENSAPLG00000016113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016843

53653586 - 53664764

11179

ENSAPLT00000033043

53652775 - 53670004

17230