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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53709097_53709931_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

53709097 - 53709931

Intron Length:

835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGT

5'SS Class:

major

3'SS Sequence:

CATATCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCCTCATATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

63.1

43.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.4

0.55

0.9

65.4

40.6

Minor 5ss

32.2

-2

3.4

38.1

46.8

Minor BPS

50.6

0.1

1.9

73.91

42.8

Associated Gene:

Gene:

C1QTNF6

Ensembl Gene ID:

ENSAPLG00000016241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016940

53708113 - 53724113

16001