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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53711803_53713868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53711803 - 53713868

Intron Length:

2066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACCTGGT

5'SS Class:

major

3'SS Sequence:

TCCTTTCCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAGAAA

U12 Branch Point Sequence:

TCTTCCTTTCCC

Flanking Amino Acid:

DDVDVYITFNGRSVCETAQR

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.3

58.2

46.8

Major BPS

44.9

-0.3

1.2

32.8

Major PPT

77.8

0.63

0.7

77.2

24.9

Minor 5ss

38.4

-1.3

3.4

49.7

46.5

Minor BPS

46.7

-0.2

3.6

74.54

42.5

Associated Gene:

Gene:

C1QTNF6

Ensembl Gene ID:

ENSAPLG00000016241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038149

53709932 - 53715007

5076