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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53747483_53750253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53747483 - 53750253

Intron Length:

2771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTGTTTATCT

Flanking Amino Acid:

RVNPDSLVLLESSVKDIVVL

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

78.8

35.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

80.2

0.68

0.8

76.7

30.6

Minor 5ss

36.6

-1.5

2.6

39.1

38.9

Minor BPS

64.5

0.53

87.39

38.7

Associated Gene:

Gene:

TMPRSS6

Ensembl Gene ID:

ENSAPLG00000000590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040498

53743866 - 53759885

16020

ENSAPLT00000000721

53743601 - 53759748

16148