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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53747483_53751260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53747483 - 53751260

Intron Length:

3778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCCCGGCGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TGAGGTTTAAAT

Flanking Amino Acid:

RVNPDSLVLLGCYRYSYVQE

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

78.8

35.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

61.3

0.25

56.5

38.8

Minor 5ss

36.6

-1.5

2.6

39.1

38.9

Minor BPS

48.8

-0

1.9

66.54

Associated Gene:

Gene:

TMPRSS6

Ensembl Gene ID:

ENSAPLG00000000590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027180

53743601 - 53759748

16148