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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53751466_53751852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53751466 - 53751852

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAGGTAGC

5'SS Class:

major

3'SS Sequence:

TCTTTCCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TTCACTCCCACT

Flanking Amino Acid:

AGPLEKHLITSIYGCSRQEP

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.3

0.27

1.4

59.8

45.2

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

83.2

0.75

0.7

81.4

23.7

Minor 5ss

36.2

-1.6

45.4

37.2

Minor BPS

43.1

-0.4

2.2

65.4

45.1

Associated Gene:

Gene:

TMPRSS6

Ensembl Gene ID:

ENSAPLG00000000590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027180

53743601 - 53759748

16148

ENSAPLT00000000721

53743601 - 53759748

16148

ENSAPLT00000040498

53743866 - 53759885

16020