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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53754420_53755262_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53754420 - 53755262

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTACGTCCA

5'SS Class:

weak_major

3'SS Sequence:

GGTGGTTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAC

U12 Branch Point Sequence:

GGTGGTTTCACA

Flanking Amino Acid:

AAYSLYNLSDPCPGEFLCSV

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.4

44.9

Major BPS

59.1

0.23

1.2

61.6

34.1

Major PPT

68.4

0.42

60.4

44.9

Minor 5ss

35.3

-1.7

3.1

46.5

41.9

Minor BPS

44.7

-0.4

2.2

56.07

43.4

Associated Gene:

Gene:

TMPRSS6

Ensembl Gene ID:

ENSAPLG00000000590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027180

53743601 - 53759748

16148

ENSAPLT00000000721

53743601 - 53759748

16148

ENSAPLT00000040498

53743866 - 53759885

16020