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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53756161_53756450_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53756161 - 53756450

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGG

5'SS Class:

major

3'SS Sequence:

TTCATCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CTTCCCTTCATC

Flanking Amino Acid:

NGTDEEQCSEGVPCGPFTHR

Intron Amino Acid Position:

510

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

0.62

1.1

77.2

Major PPT

81.1

0.7

0.8

75.7

32.7

Minor 5ss

30.3

-2.3

3.3

39.2

46.3

Minor BPS

62.1

0.36

1.8

71.44

40.3

Associated Gene:

Gene:

TMPRSS6

Ensembl Gene ID:

ENSAPLG00000000590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040498

53743866 - 53759885

16020

ENSAPLT00000027180

53743601 - 53759748

16148

ENSAPLT00000000721

53743601 - 53759748

16148