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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53757486_53758195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53757486 - 53758195

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTGCATCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

GATGTGTTATCT

Flanking Amino Acid:

VSAAHCFQDERLASPSIWTV

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

72.8

0.51

0.9

65.1

36.1

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

45.5

-0.2

2.3

65.08

45.4

Associated Gene:

Gene:

TMPRSS6

Ensembl Gene ID:

ENSAPLG00000000590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027180

53743601 - 53759748

16148

ENSAPLT00000000721

53743601 - 53759748

16148

ENSAPLT00000040498

53743866 - 53759885

16020