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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53764282_53764635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53764282 - 53764635

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TGCTTGTTATCA

Flanking Amino Acid:

TMSDGWRFEQLVNIGSSYSY

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

0.61

0.8

69.7

36.7

Minor 5ss

37.7

-1.4

3.1

48.6

47.2

Minor BPS

-0.1

2.3

63.08

43.5

Associated Gene:

Gene:

KCTD17

Ensembl Gene ID:

ENSAPLG00000030290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038232

53761144 - 53770147

9004

ENSAPLT00000001625

53761144 - 53768739

7596