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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53785741_53787266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53785741 - 53787266

Intron Length:

1526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACAGCAT

U12 Branch Point Sequence:

TTCTCTTCCAAG

Flanking Amino Acid:

MEQGVLEVSPSPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

46.8

-0.2

1.4

53.7

41.6

Major PPT

75.8

0.58

75.2

33.5

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

45.9

-0.4

2.1

56.38

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038877

53785732 - 53805078

19347