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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53789179_53790236_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53789179 - 53790236

Intron Length:

1058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTTTCTCATTC

Flanking Amino Acid:

GFNLRSNIFQGGPLETRSLM

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

86.7

0.83

0.7

84.4

23.5

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

54.7

0.13

1.8

68.51

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038877

53785732 - 53805078

19347