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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53797697_53799999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53797697 - 53799999

Intron Length:

2303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AAGTGTTTAAAT

Flanking Amino Acid:

PASTTWGYSKEAVSQLPASQ

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

100

1.24

0.5

100

Major PPT

87.1

0.84

0.7

80.8

31.2

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

53.2

0.18

1.9

68.61

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038858

53795641 - 53806443

10803

ENSAPLT00000002084

53795641 - 53809558

13918