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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53801465_53801560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53801465 - 53801560

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGAT

5'SS Class:

major

3'SS Sequence:

TTGTATTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTCTTTGTATTC

Flanking Amino Acid:

EYWKTSQMETVTRKPINDDP

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

72.7

38.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

79.3

0.66

0.9

77.5

36.5

Minor 5ss

33.4

-1.9

3.6

48.8

47.3

Minor BPS

46.1

-0.3

2.1

60.49

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038858

53795641 - 53806443

10803

ENSAPLT00000002084

53795641 - 53809558

13918