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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5380421_5391845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5380421 - 5391845

Intron Length:

11425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAACC

Flanking Amino Acid:

GAFSGIQQMAGMNALQLQNL

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

80.6

29.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.6

0.73

0.8

77.4

30.3

Minor 5ss

-1.1

2.8

49.9

46.4

Minor BPS

71.6

0.66

1.7

85.12

32.5

Associated Gene:

Gene:

CELF2

Ensembl Gene ID:

ENSAPLG00000010064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030189

5188947 - 5428090

239144

ENSAPLT00000028650

5175313 - 5426764

251452

ENSAPLT00000010552

5188947 - 5426764

237818

ENSAPLT00000034517

5061983 - 5428458

366476

ENSAPLT00000031223

5188947 - 5428458

239512