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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53804763_53805312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53804763 - 53805312

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCTACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TGTTCCCCATTT

Flanking Amino Acid:

TYKREWESWEKDALRLLSNT

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

78.9

35.3

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

69.6

0.44

0.9

61.9

38.7

Minor 5ss

-1.8

3.5

46.6

48.7

Minor BPS

48.6

-0

2.1

74.08

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038858

53795641 - 53806443

10803

ENSAPLT00000002084

53795641 - 53809558

13918