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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53806444_53807913_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53806444 - 53807913

Intron Length:

1470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTGTGTAACC

Flanking Amino Acid:

MTLNFNHSHGKNKEMTCAFH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

66.1

0.36

1.1

59.1

45.3

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

49.6

-0

2.4

69.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002084

53795641 - 53809558

13918