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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53822562_53823755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53822562 - 53823755

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

GTCACATTGAGA

Flanking Amino Acid:

IASFSYKYFLRQKKLWEEKI

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

59.9

0.25

1.2

38.9

Major PPT

89.9

0.9

0.7

84.9

29.9

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

46.7

-0.2

1.9

57.18

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043101

53819880 - 53825730

5851