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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53825318_53825595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53825318 - 53825595

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTATGGACT

5'SS Class:

major

3'SS Sequence:

TTCTGTGTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TATTCTGAGATC

Flanking Amino Acid:

MIKVLPPTNVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.1

62.4

41.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

81.6

0.71

0.9

75.5

38.4

Minor 5ss

42.3

-0.9

3.1

54.7

43.4

Minor BPS

45.6

-0.3

2.2

61.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043101

53819880 - 53825730

5851