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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53888668_53890595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53888668 - 53890595

Intron Length:

1928

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGCAA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCT

Flanking Amino Acid:

AYSGRSENIRGDPAVGKSAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

59.1

41.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

-2.5

3.5

37.4

47.3

Minor BPS

74.5

0.85

1.5

91.05

32.7

Associated Gene:

Gene:

IFT27

Ensembl Gene ID:

ENSAPLG00000002421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046107

53888566 - 53900593

12028

ENSAPLT00000002460

53888566 - 53894504

5939

ENSAPLT00000046666

53888566 - 53900612

12047