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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53895221_53906273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53895221 - 53906273

Intron Length:

11053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGAATA

5'SS Class:

major

3'SS Sequence:

TCCTATTGATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

TTCCTATTGATT

Flanking Amino Acid:

IGVSAEWGHIEAAVHTNLST

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

76.3

32.5

Major BPS

76.2

0.65

39.8

Major PPT

65.5

0.35

66.2

39.3

Minor 5ss

38.9

-1.2

3.1

51.2

40.4

Minor BPS

54.5

0.22

1.6

73.03

38.1

Associated Gene:

Gene:

IFT27

Ensembl Gene ID:

ENSAPLG00000002421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041213

53887578 - 53908507

20930