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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53912560_53954938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53912560 - 53954938

Intron Length:

42379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGAT

5'SS Class:

major

3'SS Sequence:

TCTTGTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTTTTCTCT

Flanking Amino Acid:

SGLWRTCCLEGNFKGLCKQI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

33.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

76.4

0.59

0.8

69.5

36.8

Minor 5ss

40.5

-1.1

3.2

57.9

46.8

Minor BPS

45.5

-0.2

3.6

82.72

39.3

Associated Gene:

Gene:

CACNG2

Ensembl Gene ID:

ENSAPLG00000002618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002644

53912414 - 53959146

46733